The origin of Alopecurus × brachystylus Peterm. according to the results of next-generation sequencing (NGS)

УДК 575.17:582.52

Authors

  • A. A. Gnutikov N. I. Vavilov Institute of Plant Genetic Resources (VIR)
  • N. N. Nosov V. L. Komarov Botanical Institute (BIN RAS)
  • E. O. Punina V. L. Komarov Botanical Institute (BIN RAS)
  • A. V. Rodionov Saint-Petersburg State University (SPbSU)

DOI:

https://doi.org/10.14258/pbssm.2020001

Keywords:

Alopecurus × brachystylus, hybrids, ITS, NGS, phylogeny, Poaceae

Abstract

A molecular phylogenetic study of the hybrid species Alopecurus × brachystylus Peterm. and somesupposed ancestral taxa was carried out. Next-generation sequencing (NGS) of the ITS1 sequence and the start of the5.8S rRNA gene was used on the Illumina platform. According to NGS sequencing, genome of the A. × brachystylusforms common subgenomes with representatives of the section Alopecurium: A. geniculatus and A. aequalis, as well asrepresentatives of the type section: A. pratensis, A. arundinaceus, and alpine A. vlassowii. In addition, it was found thatA. vlassowii (section Alopecurus) contains sequences identical to the species of another section, Alopecurium.

Downloads

Download data is not yet available.

References

Цвелёв Н. Н. Злаки СССР. – Л.: Наука, 1976. – 788 c.

Gnutikov A. A., Punina E. O., Nosov N. N., Rodionov A. V. In: IAPT/IOPB chromosome data 26 (K. Marhold & J.Kučera, eds.) // Taxon, 2017. – Vol. 66, No 6. – P. 1489. E10–E11. DOI: 10.12705/666.30

Gnutikov A. A., Punina E. O., Nosov N. N., Rodionov A. V. In: IAPT/IOPB chromosome data 27 (K. Marhold & J.Kučera, eds.) // Taxon, 2018. – Vol. 67, No 5. – P. 1043. E8–E9. DOI: 10.12705/675.24

Hollingsworth P. M., Graham S. W., Little, D. P. Choosing and using a plant DNA barcode // PLoS One, 2011. – Vol. 6, Iss. 5. e19254. DOI: 10.1371/journal.pone.0019254

Kovarik A., Pires J. C., Leitch A. R., Lim K. Y., Sherwood A. M., Matyasek R., Rocca J., Soltis D. E., Soltis P. S.Rapid Concerted Evolution of Nuclear Ribosomal DNA in Two Tragopogon Allopolyploids of Recent and Recurrent Origin // Genetics, 2005. – Vol. 169, № 2. – P. 931–944. DOI: 10.1534/genetics.104.032839

Sieber V. K., Murray B. G. The cytology of the genus Alopecurus (Gramineae) // Botanical Journal of the Linnaean Society, 1979. – Vol. 79. – P. 343–355. DOI: 10.1111/j.1095-8339.1979.tb01822.x

Sieber V. K., Murray B. G. Spontaneous polyploids in marginal populations of Alopecurus bulbosus Gouan (Poaceae) // Botanical Journal of the Linnaean Society, 1980. – Vol. 81. – P. 293–300. DOI: 10.1111/j.1095-8339.1980.tb01680.x

Stace C. A., Preston C. D., Pearman, D. A. Hybrid flora of the British Isles. – Durham: BSBI Publications, 2015. – 501 p.

Wang W., Ma L., Becher H., Garcia S., Kovarikova A., Leitch I. J., Leitch A. R., Kovarik A. Astonishing 35S rDNA diversity in the gymnosperm species Cycas revoluta Thunb. // Chromosoma, 2016. – Vol. 125. – P. 683–699. DOI: 10.1007/s00412-015-0556-3

Downloads

Published

2020-06-01

Issue

Section

Molecular methods in the study of plants and chemosystematics

How to Cite

The origin of Alopecurus × brachystylus Peterm. according to the results of next-generation sequencing (NGS): УДК 575.17:582.52 . (2020). Проблемы ботаники Южной Сибири и Монголии, 19(1), 5-7. https://doi.org/10.14258/pbssm.2020001

Most read articles by the same author(s)